SNP Profiles of GU 171/C View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AA	TT	CC	GG	TT	AA	AA	CC	GG	GG	GG	CC	AA
1._RUQ_195	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
2._RUQ_195	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
3._GU_171_/C	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
4._GU_171_/C	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
5._GU_171_/C	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
6._GU_171_/C	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
7._GU_171_/C	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
8._GU_171_/C	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
9._GU_171_/C	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
10._GC-01-094-5-11	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
11._GC-01-094-5-11	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
12._GC-01-094-5-11	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
13._GC-01-094-5-11	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
14._GC-01-094-5-11	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
15._GC-01-094-5-11	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
16._GC-01-094-5-11	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
17._GC-01-94-5-11	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
18._GC-01-94-5-11	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
19._RUQ_195	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AA	CT	CC	CT	AA	CC	AA	CC	CC	CC	GG	CC	AA
1._RUQ_195	GG	_	_	_	_	_	CC	_	CC	CC	_	_	_	_
2._RUQ_195	_	_	_	_	_	_	CC	_	CC	_	_	_	_	AA
3._GU_171_/C	_	_	_	_	_	_	CC	_	CC	_	_	_	_	GG
4._GU_171_/C	_	_	_	_	_	_	CC	_	CC	_	_	_	_	GG
5._GU_171_/C	_	_	_	_	_	_	CC	_	CC	_	_	_	_	GG
6._GU_171_/C	_	_	_	_	_	_	CC	_	CC	_	_	_	_	GG
7._GU_171_/C	_	_	_	_	_	_	CC	_	CC	_	_	_	_	GG
8._GU_171_/C	_	_	_	_	_	_	CC	_	CC	_	_	_	_	GG
9._GU_171_/C	_	_	_	_	_	_	CC	_	CC	_	_	_	_	GG
10._GC-01-094-5-11	GG	_	_	_	_	_	CC	_	CC	CC	_	_	_	GG
11._GC-01-094-5-11	GG	_	_	_	_	_	CC	_	CC	CC	_	_	_	GG
12._GC-01-094-5-11	GG	_	_	_	_	_	CC	_	CC	CC	_	_	_	GG
13._GC-01-094-5-11	GG	_	_	_	_	_	CC	_	CC	CC	_	_	_	GG
14._GC-01-094-5-11	GG	_	_	_	_	_	CC	_	CC	CC	_	_	_	GG
15._GC-01-094-5-11	GG	_	_	_	_	_	CC	_	CC	CC	_	_	_	GG
16._GC-01-094-5-11	GG	_	_	_	_	_	CC	_	CC	CC	_	_	_	GG
17._GC-01-94-5-11	GG	_	_	_	_	_	CC	_	CC	GG	_	_	_	_
18._GC-01-94-5-11	GG	_	_	_	_	_	CC	_	CC	GG	_	_	_	_
19._RUQ_195	GG	_	_	_	_	_	CC	_	CC	GG	_	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	GG	AA	CT	TT	AA	AA	CC	GG	GG	CC	AA	CC
1._RUQ_195	_	CC	GG	AA	_	_	AA	_	_	GG	GG	_	AA	CC
2._RUQ_195	_	_	GG	_	_	_	_	_	_	GG	_	_	AA	_
3._GU_171_/C	_	_	GG	_	_	_	_	_	_	GG	_	_	AA	_
4._GU_171_/C	_	_	GG	_	_	_	_	_	_	GG	_	_	AA	_
5._GU_171_/C	_	_	GG	_	_	_	_	_	_	GG	_	_	AA	_
6._GU_171_/C	_	_	GG	_	_	_	_	_	_	GG	_	_	AA	_
7._GU_171_/C	_	_	GG	_	_	_	_	_	_	GG	_	_	AA	_
8._GU_171_/C	_	_	GG	_	_	_	_	_	_	GG	_	_	AA	_
9._GU_171_/C	_	_	GG	_	_	_	_	_	_	GG	_	_	AA	_
10._GC-01-094-5-11	_	CC	GG	AA	_	_	AA	_	GG	GG	GG	_	AA	CC
11._GC-01-094-5-11	_	CC	GG	AA	_	_	AA	_	GG	GG	GG	_	AA	CC
12._GC-01-094-5-11	_	CC	GG	AA	_	_	AA	_	GG	GG	GG	_	AA	CC
13._GC-01-094-5-11	_	CC	GG	AA	_	_	AA	_	GG	GG	GG	_	AA	CC
14._GC-01-094-5-11	_	CC	GG	AA	_	_	AA	_	GG	GG	GG	_	AA	CC
15._GC-01-094-5-11	_	CC	GG	AA	_	_	AA	_	GG	GG	GG	_	AA	CC
16._GC-01-094-5-11	_	CC	GG	AA	_	_	AA	_	GG	GG	GG	_	AA	CC
17._GC-01-94-5-11	_	_	CC	AA	_	_	AA	_	CC	CC	GG	_	AA	_
18._GC-01-94-5-11	_	_	CC	AA	_	_	AA	_	CC	CC	GG	_	AA	_
19._RUQ_195	_	_	CC	AA	_	_	AA	_	CC	CC	GG	_	AA	_

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	AA	GG	TT	CC	TT	AA	TT	GG	AA	GG	GG	TT	AA
1._RUQ_195	_	_	_	_	_	_	_	TT	_	_	_	GG	_	_
2._RUQ_195	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
3._GU_171_/C	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
4._GU_171_/C	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
5._GU_171_/C	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
6._GU_171_/C	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
7._GU_171_/C	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
8._GU_171_/C	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
9._GU_171_/C	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
10._GC-01-094-5-11	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
11._GC-01-094-5-11	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
12._GC-01-094-5-11	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
13._GC-01-094-5-11	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
14._GC-01-094-5-11	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
15._GC-01-094-5-11	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
16._GC-01-094-5-11	_	_	GG	_	CC	_	_	TT	_	_	_	GG	_	_
17._GC-01-94-5-11	_	_	GG	_	_	_	_	AA	_	_	_	CC	_	_
18._GC-01-94-5-11	_	_	GG	_	_	_	_	AA	_	_	_	CC	_	_
19._RUQ_195	_	_	GG	_	_	_	_	AA	_	_	_	CC	_	_

Input profile: GU_171_/C RUQ_195

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._GU_171_/C RUQ_195

identical
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._GU_171_/C RUQ_195

identical
12 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

3._GU_171_/C

91.7 %
12 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1511 2 > FP

Dapeng Zhang, 2016

4._GU_171_/C

91.7 %
12 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1511 7

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

5._GU_171_/C

91.7 %
12 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1511 9

Dapeng Zhang, 2016

6._GU_171_/C

91.7 %
12 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1511 12

Dapeng Zhang, 2016

7._GU_171_/C

91.7 %
12 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1511 14

Dapeng Zhang, 2016

8._GU_171_/C

91.7 %
12 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1511 1 > FP

Dapeng Zhang, 2016

9._GU_171_/C

91.7 %
12 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1511 10 > F

Dapeng Zhang, 2016

10._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14

11._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

12._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10 > FP2

13._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

14._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

15._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP3

16._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

17._GU_171_/C GC-01-94-5-11

68.8 %
16 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 1, Block: 5, Rep: 11, Tree: 7

Notes: MCCS_Structure_refs_above_0.9membership

18._GU_171_/C GC-01-94-5-11

68.8 %
16 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1

Notes: Brazil_Selections_Poss_grandparent

19._GU_171_/C RUQ_195

68.8 %
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP546
21	TcSNP577	22	TcSNP589	23	TcSNP591	24	TcSNP602	25	TcSNP640
26	TcSNP642	27	TcSNP644	28	TcSNP645	29	TcSNP660	30	TcSNP702
31	TcSNP723	32	TcSNP731	33	TcSNP739	34	TcSNP800	35	TcSNP823
36	TcSNP835	37	TcSNP836	38	TcSNP872	39	TcSNP899	40	TcSNP945
41	TcSNP998	42	TcSNP999	43	TcSNP1010	44	TcSNP1019	45	TcSNP1062
46	TcSNP1112	47	TcSNP1144	48	TcSNP1205	49	TcSNP1230	50	TcSNP1253
51	TcSNP1275	52	TcSNP1401	53	TcSNP1404	54	TcSNP1458	55	TcSNP1524
56	TcSNP1527